Knowledgebase for Addiction-Related Genes
Home | Score | Chromosome | Pathway | Advanced Search | BLAST Search | Downloads | Publications | FAQ & Help |   

KARG (Knowledgebase for Addiction Related Genes) >> Gene Entry 
For each addiction related gene, evidences from various strategies have been listed in detail. In addition, each gene were further annotated with various online databases including basic information, gene ontology annotation, protein interaction and domain information.

Basic Information
Gene ID:6431
Official Symbol:SFRS6
Other Aliases:B52|MGC5045|SRP55
See related:HGNC:10788|MIM:601944|HPRD:09054
Chromosome:20
Location:20q12-q13.1
Gene Description:splicing factor, arginine/serine-rich 6
Gene type:protein-coding
Gene Structure:
Genomic Context:
KARG Evidence 1
KARG ID:EVIC0322
ORGANISM:human
Entrez Gene ID:6431
Evidence Type:Mapping from mouse
Evidence ID Type:Entrez Gene
Evidence ID:67996
Addiction Drug:
Addiction Drug Detail:
Addiction Brain Area:
Drug Effects:
Fold Change:
Mapped Allen Brain Atlas (Click to check expression images in Allan Brain Atlas)
Mouse Entrez Gene IDBrain RegionBrain Region DetailExpression LevelExpression Density
67996CBCerebellum23.347867965698243.9055976867676
67996CTXCerebral cortex100.0100.0
67996HIPHippocampal region99.0268020629883100.0
67996HPFHippocampal formation94.5998687744141100.0
67996HYHypothalamus18.569042205810516.1843814849854
67996LSXLateral septal complex61.363143920898447.4405174255371
67996MBMidbrain22.159936904907223.734094619751
67996MYMedulla18.250995635986322.8010158538818
67996OLFOlfactory bulb82.229179382324283.9547805786133
67996PPons15.284954071044918.6436061859131
67996PALPallidum27.957571029663125.8240947723389
67996RHPRetrohippocampal region87.089866638183683.9315185546875
67996sAMYStriatum-like amygdalar nuclei86.974197387695377.7802734375
67996STRStriatum69.916915893554756.1909294128418
67996STRdStriatum dorsal region68.953056335449255.0321197509766
67996STRvStriatum ventral region67.430885314941451.1633491516113
67996THThalamus33.998752593994132.154670715332
Gene Ontology
Gene IDGO IDEvidenceGO TypeGO Description
6431GO:0000166IEAFunctionnucleotide binding
6431GO:0000398IEAProcessnuclear mRNA splicing, via spliceosome
6431GO:0003723IEAFunctionRNA binding
6431GO:0005634IEAComponentnucleus
6431GO:0006376TASProcessmRNA splice site selection
Interaction Information
Gene Product IDInteractant Gene IDInteractant Gene Product IDInteractant Gene Product NameSourceSource ID
NP_006266.2--SRPK1HPRD09054
NP_006266.26732NP_003128.3SFRS protein kinase 1HPRD15992
NP_006266.2140890NP_631907.1splicing factor, arginine/serine-rich 12HPRD18043
Domain Information
Gene IDUniprot/Swissprot IDUniprot/Swissprot ACCInterpro IDInterpro Short DescriptionInterpro Long Description
6431SFRS6_HUMANQ13247IPR000504RNP1_RNA_bdRNA-binding region RNP-1 (RNA recognition motif)

© Center for Bioinformatics(CBI), Peking University
Any Comments and suggestions to : KARG GROUP.