Knowledgebase for Addiction-Related Genes
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KARG (Knowledgebase for Addiction Related Genes) >> Gene Entry 
For each addiction related gene, evidences from various strategies have been listed in detail. In addition, each gene were further annotated with various online databases including basic information, gene ontology annotation, protein interaction and domain information.

Basic Information
Gene ID:6606
Official Symbol:SMN1
Other Aliases:BCD541|SMA1|SMA2|SMA3|SMA4|SMN|SMNT|T-BCD541
See related:HGNC:11117|MIM:600354|HPRD:02646
Chromosome:5
Location:5q13
Gene Description:survival of motor neuron 1, telomeric
Gene type:protein-coding
Gene Structure:
Genomic Context:
KARG Evidence 1
KARG ID:EVIC0411
ORGANISM:human
Entrez Gene ID:6606
Evidence Type:Mapping from rat
Evidence ID Type:Entrez Gene
Evidence ID:64301
Addiction Drug:
Addiction Drug Detail:
Addiction Brain Area:
Drug Effects:
Fold Change:
KARG Evidence 2
KARG ID:HOT0057
ORGANISM:human
Entrez Gene ID:6606
Evidence Type:Whole Genome Association
Evidence ID Type:PUBMED
Evidence ID:NA
Addiction Drug:
Addiction Drug Detail:
Addiction Brain Area:
Drug Effects:
Fold Change:
Mapped Allen Brain Atlas (Click to check expression images in Allan Brain Atlas)
Mouse Entrez Gene IDBrain RegionBrain Region DetailExpression LevelExpression Density
Gene Ontology
Gene IDGO IDEvidenceGO TypeGO Description
6606GO:0000245NASProcessspliceosome assembly
6606GO:0003723IEAFunctionRNA binding
6606GO:0005515IPIFunctionprotein binding
6606GO:0005515NASFunctionprotein binding
6606GO:0005681IEAComponentspliceosome complex
6606GO:0005737NASComponentcytoplasm
6606GO:0015030NASComponentCajal body
Interaction Information
Gene Product IDInteractant Gene IDInteractant Gene Product IDInteractant Gene Product NameSourceSource ID
-8880AAH17247.1FUBP1 proteinHPRD10349
-7157NP_000537.2tumor protein p53HPRD01859
-6628NP_003082.1small nuclear ribonucleoprotein polypeptide B/B' isoform BHPRD01655
-8487NP_003607.1SMN-interacting protein 1 isoform alphaHPRD03999
-8161NP_004636.1coilinHPRD02605
-10236NP_005817.1heterogeneous nuclear ribonucleoprotein RHPRD06228
-10492NP_006363.3synaptotagmin binding, cytoplasmic RNA interacting proteinHPRD06734
-11157NP_009011.1Sm protein FHPRD06286
-25804NP_036453.1U6 snRNA-associated Sm-like protein 4HPRD06284
-23658NP_036454.1U6 snRNA-associated Sm-like protein 5HPRD06285
-27257NP_055277.1Lsm1 proteinHPRD06281
-27258NP_055278.1Lsm3 proteinHPRD06283
-25929NP_056280.1gemin 5HPRD06109
-51690NP_057283.1U6 snRNA-associated Sm-like protein LSm7HPRD06287
-54433NP_061856.1nucleolar protein family A, member 1HPRD07569
-57819NP_067000.1LSM2 homolog, U6 small nuclear RNA associatedHPRD06282
-79760NP_078983.1gemin 7HPRD07600
NP_000335.18487-SMN interacting protein 1HPRD02646
NP_000335.111218-DDX20HPRD02646
NP_000335.18880-Far upstream element binding proteinHPRD02646
NP_000335.111157-LSM6HPRD02646
NP_000335.123658-LSM5HPRD02646
NP_000335.125804-LSM4HPRD02646
NP_000335.127257-LSM1HPRD02646
NP_000335.127258-LSM3HPRD02646
NP_000335.151690-LSM7HPRD02646
NP_000335.157819-LSM2HPRD02646
NP_000335.154433-Nucleolar protein family A, member 1HPRD02646
NP_000335.110236-Heterogeneous nuclear ribonucleoprotein RHPRD02646
NP_000335.18161-CoilinHPRD02646
NP_000335.17157-p53HPRD02646
NP_000335.125929-Gemin 5HPRD02646
NP_000335.16628-SNRPBHPRD02646
NP_000335.110492-NS1 associated protein 1HPRD02646
NP_000335.179760-Gemin 7HPRD02646
NP_000335.16606NP_000335.1survival of motor neuron 1, telomeric isoform dBIND145586
NP_000335.16628NP_003082.1small nuclear ribonucleoprotein polypeptide B/B' isoform BHPRD01655
NP_000335.110248NP_005828.1processing of precursor 7, ribonuclease P subunitBIND134164
NP_000335.111218NP_009135.3DEAD (Asp-Glu-Ala-Asp) box polypeptide 20HPRD05859
NP_000335.16814NP_009200.1syntaxin binding protein 3HPRD10517
NP_000335.1134353NP_775762.1LSM11, U7 small nuclear RNA associatedHPRD11289
NP_000335.16628NP_937859.1small nuclear ribonucleoprotein polypeptide B/B' isoform B'BIND182589
NP_000335.19406NP_976225.1zinc finger protein 265 isoform 1HPRD02646
NP_000335.19406NP_976225.1zinc finger protein 265 isoform 1HPRD09185
NP_000335.126578Q92882Osteoclast-stimulating factor 1.HPRD17808
Domain Information
Gene IDUniprot/Swissprot IDUniprot/Swissprot ACCInterpro IDInterpro Short DescriptionInterpro Long Description
6606IPR000694PRO_richProline-rich region
6606IPR010304SMNSurvival motor neuron
6606IPR002999TudorTudor
6606SMN_HUMANQ16637IPR000694PRO_richProline-rich region
6606SMN_HUMANQ16637IPR010304SMNSurvival motor neuron
6606SMN_HUMANQ16637IPR002999TudorTudor

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