Knowledgebase for Addiction-Related Genes
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KARG (Knowledgebase for Addiction Related Genes) >> Gene Entry 
For each addiction related gene, evidences from various strategies have been listed in detail. In addition, each gene were further annotated with various online databases including basic information, gene ontology annotation, protein interaction and domain information.

Basic Information
Gene ID:81609
Official Symbol:SNX27
Other Aliases:KIAA0488|MGC126871|MGC126873|MGC20471|MY014
See related:HGNC:20073|HPRD:11591
Chromosome:1
Location:1q21.3
Gene Description:sorting nexin family member 27
Gene type:protein-coding
Gene Structure:
Genomic Context:
KARG Evidence 1
KARG ID:EVIC0555
ORGANISM:human
Entrez Gene ID:81609
Evidence Type:Mapping from rat
Evidence ID Type:Entrez Gene
Evidence ID:260323
Addiction Drug:
Addiction Drug Detail:
Addiction Brain Area:
Drug Effects:
Fold Change:
Mapped Allen Brain Atlas (Click to check expression images in Allan Brain Atlas)
Mouse Entrez Gene IDBrain RegionBrain Region DetailExpression LevelExpression Density
76742CBCerebellum48.780677795410294.4698715209961
76742CTXCerebral cortex100.094.0624008178711
76742HIPHippocampal region80.9366989135742100.0
76742HPFHippocampal formation95.0100479125977100.0
76742HYHypothalamus68.456825256347761.935604095459
76742LSXLateral septal complex70.11389923095756.4243659973145
76742MBMidbrain73.221946716308677.1195220947266
76742MYMedulla74.126838684082100.0
76742OLFOlfactory bulb87.375434875488386.1768951416016
76742PPons68.563911437988386.3917617797852
76742PALPallidum70.960311889648473.9692687988281
76742RHPRetrohippocampal region100.0100.0
76742sAMYStriatum-like amygdalar nuclei100.096.3856887817383
76742STRStriatum98.047050476074279.7597427368164
76742STRdStriatum dorsal region100.083.3805389404297
76742STRvStriatum ventral region93.856185913085974.5237274169922
76742THThalamus69.503379821777367.0686874389648
Gene Ontology
Gene IDGO IDEvidenceGO TypeGO Description
81609GO:0005515IEAFunctionprotein binding
81609GO:0007242IEAProcessintracellular signaling cascade
81609GO:0015031IEAProcessprotein transport
81609GO:0035091IEAFunctionphosphoinositide binding
Interaction Information
Gene Product IDInteractant Gene IDInteractant Gene Product IDInteractant Gene Product NameSourceSource ID
Domain Information
Gene IDUniprot/Swissprot IDUniprot/Swissprot ACCInterpro IDInterpro Short DescriptionInterpro Long Description
81609IPR001478PDZPDZ/DHR/GLGF
81609IPR001683PXPhox-like
81609IPR000159RARA

© Center for Bioinformatics(CBI), Peking University
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